Jakob Troidl

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I am a Ph. D. candidate in computer science at Harvard University, advised by Hanspeter Pfister. I am broadly interested in data visualization and applied machine learning, especially with applications in computational neuroscience. Specifically, my research focuses on building scalable interactive visual analysis tools and representation learning approaches to analyze the hidden architecture of the brain. Currently, I am working with Srini Turaga at HHMI Janelia as a visiting researcher.

I hold a M. Sc. in visual computing from TU Wien, Austria and a B. Sc. (with Honors) in medical informatics from the same university. I was born and raised in the beautiful town of Regensburg in Germany. On the side, I am a member of beetsbook.club.

selected publications

  1. niiv.png
    niiv: Fast Self-supervised Neural Implicit Isotropic Volume Reconstruction
    Jakob Troidl, Yiqing Liang , Johanna Beyer , and 5 more authors
    bioarxiv, 2024
  2. h01.jpeg
    A petavoxel fragment of human cerebral cortex reconstructed at nanoscale resolution
    Alexander Shapson-Coe , Michał Januszewski , Daniel R. Berger , and 28 more authors
    Science, 2024
  3. vimo-teaser-02.png
    Vimo: Visual Analysis of Neuronal Connectivity Motifs
    Jakob Troidl, Simon Warchol , Jinhan Choi , and 8 more authors
    IEEE Transactions on Visualization and Computer Graphics (IEEE VIS), 2023
  4. connectomics_star.png
    A Survey of Visualization and Analysis in High-Resolution Connectomics
    Johanna Beyer* , Jakob Troidl*, Saeed Boorboor , and 3 more authors
    In Computer Graphics Forum , 2022